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scan domain search  (InterPro Inc)

 
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    InterPro Inc scan domain search
    DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase <t>domain</t> presence or absence was classified by the <t>InterPro</t> <t>Scan</t> domain <t>search</t> ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications
    Scan Domain Search, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/scan domain search/product/InterPro Inc
    Average 90 stars, based on 1 article reviews
    scan domain search - by Bioz Stars, 2026-06
    90/100 stars

    Images

    1) Product Images from "Pest status, molecular evolution, and epigenetic factors derived from the genome assembly of Frankliniella fusca , a thysanopteran phytovirus vector"

    Article Title: Pest status, molecular evolution, and epigenetic factors derived from the genome assembly of Frankliniella fusca , a thysanopteran phytovirus vector

    Journal: BMC Genomics

    doi: 10.1186/s12864-023-09375-5

    DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase domain presence or absence was classified by the InterPro Scan domain search ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications
    Figure Legend Snippet: DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase domain presence or absence was classified by the InterPro Scan domain search ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications

    Techniques Used: DNA Methylation Assay, Gene Expression, Expressing



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    DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase <t>domain</t> presence or absence was classified by the <t>InterPro</t> <t>Scan</t> domain <t>search</t> ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications
    Scan Domain Search, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/scan domain search/product/InterPro Inc
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    scan domain search - by Bioz Stars, 2026-06
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    protein domain search interpro scan  (InterPro Inc)
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    DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase <t>domain</t> presence or absence was classified by the <t>InterPro</t> <t>Scan</t> domain <t>search</t> ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications
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    Image Search Results


    DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase domain presence or absence was classified by the InterPro Scan domain search ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications

    Journal: BMC Genomics

    Article Title: Pest status, molecular evolution, and epigenetic factors derived from the genome assembly of Frankliniella fusca , a thysanopteran phytovirus vector

    doi: 10.1186/s12864-023-09375-5

    Figure Lengend Snippet: DNA methylation targets and molecular mediators. A CpGo/e of the F. fusca genomic features: exons, introns, and promoters and transposable elements (TEs) compared with the distribution of coding sequences (CDS). B DNA methyltransferase and DNMT-like gene expression level (gene count) in non-viruliferous individuals compared with the average expression level of all genes for each developmental stage. Individual points correspond to gene expression levels, whereas the boxplots are representative of the expression level distribution of the whole transcriptome per each developmental stage. The C5 methyltransferase domain presence or absence was classified by the InterPro Scan domain search ( n = 52). C DNMT phylogenetic tree from F. fusca , F. occidentalis , A. mellifera , N. vitripennis , A. pisum , and H. sapiens . Numbers at branch nodes are confidence values based on 1000 bootstrap replications

    Article Snippet: The C5 methyltransferase domain presence or absence was classified by the InterPro Scan domain search ( n = 52).

    Techniques: DNA Methylation Assay, Gene Expression, Expressing